# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "MuTATE" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'MuTATE: Multi-Target Automated Tree Engine (MuTATE)'
version: 0.1.0
doi: 10.1038/s44401-025-00025-4
identifiers:
- type: doi
  value: 10.32614/CRAN.package.MuTATE
abstract: Recursively partitions datasets on binary splits across multiple targets
  having different dependent variable types, including categorical, continuous, count,
  and survival outcomes. This overcomes single-target limitations of traditional decision
  trees while retaining model interpretability. See Ayton and Trevino (2023) <https://doi.org/10.1093/bioinformatics/btad507>
  and Ayton et al. (2025) <https://doi.org/10.1038/s44401-025-00025-4> for details.
authors:
- family-names: Ayton
  given-names: Sarah
  email: sarahgabrielleayton@gmail.com
  orcid: https://orcid.org/0000-0001-5247-9912
preferred-citation:
  type: article
  title: 'MuTATE: an interpretable multi-endpoint machine learning framework for automated
    molecular subtyping in cancer'
  authors:
  - family-names: Ayton
    given-names: Sarah G.
  - family-names: Pavlicova
    given-names: Martina
  - family-names: Robles-Espinoza
    given-names: Carla Daniela
  - family-names: Fuentes-Aguilar
    given-names: Rita Q.
  - family-names: Garza-Hernandez
    given-names: Debora
  - family-names: Martínez-Ledesma
    given-names: Emmanuel
  - family-names: Tamez-Peña
    given-names: Jose Gerardo
  - family-names: Garcia-Pompermayer
    given-names: Mario R.
  - family-names: Trevino
    given-names: Víctor
  journal: npj Health Systems
  year: '2025'
  volume: '2'
  issue: '1'
  doi: 10.1038/s44401-025-00025-4
  start: '23'
repository: https://sarahayton.r-universe.dev
repository-code: https://github.com/SarahAyton/MuTATE
commit: 2b43070ae5df67dee3d71ff252628bbdd1b6374f
url: https://github.com/SarahAyton/MuTATE
date-released: '2026-08-27'
contact:
- family-names: Ayton
  given-names: Sarah
  email: sarahgabrielleayton@gmail.com
  orcid: https://orcid.org/0000-0001-5247-9912